From 5b0b1d0b941ba338d449f9261bdf4cb2b679d048 Mon Sep 17 00:00:00 2001 From: Hongxu Jia Date: Tue, 20 Sep 2022 02:53:11 -0700 Subject: [PATCH] fix wrong file driver version Due to commit [1] applied in hdf5 (1.13.2), import hdf5 failed |>>> import h5py |Traceback (most recent call last): | File "", line 1, in | File "/usr/lib/python3.10/site-packages/h5py/__init__.py", line 56, in | from . import h5a, h5d, h5ds, h5f, h5fd, h5g, h5r, h5s, h5t, h5p, h5z, h5pl | File "h5py/h5fd.pyx", line 220, in init h5py.h5fd |RuntimeError: Wrong file driver version # (wrong file driver version #) Initial driver version to fix the error [1] https://github.com/HDFGroup/hdf5/commit/42b767fc67ad1e13735e3cee2077f2e108f9463e Upstream-Status: Submitted [https://github.com/h5py/h5py/pull/2153] Signed-off-by: Hongxu Jia --- h5py/api_types_hdf5.pxd | 1 + h5py/h5fd.pyx | 1 + 2 files changed, 2 insertions(+) diff --git a/h5py/api_types_hdf5.pxd b/h5py/api_types_hdf5.pxd index 6977f1a7..312fdaa0 100644 --- a/h5py/api_types_hdf5.pxd +++ b/h5py/api_types_hdf5.pxd @@ -237,6 +237,7 @@ cdef extern from "hdf5.h": # Class information for each file driver ctypedef struct H5FD_class_t: + unsigned version; const char *name haddr_t maxaddr H5F_close_degree_t fc_degree diff --git a/h5py/h5fd.pyx b/h5py/h5fd.pyx index 04aff077..d41953d0 100644 --- a/h5py/h5fd.pyx +++ b/h5py/h5fd.pyx @@ -191,6 +191,7 @@ cdef herr_t H5FD_fileobj_flush(H5FD_fileobj_t *f, hid_t dxpl, hbool_t closing) e cdef H5FD_class_t info memset(&info, 0, sizeof(info)) +info.version = 0x01 info.name = 'fileobj' info.maxaddr = libc.stdint.SIZE_MAX - 1 info.fc_degree = H5F_CLOSE_WEAK -- 2.37.1